Metabolic engineering of a diazotrophic bacterium improves ammonium release and biofertilization of plants and microalgae

Metabolic Engineering, Volume 40, Pages 59-68, 2017

Rafael Ambrosio, Juan Cesar Federico Ortiz-Marquez, Leonardo Curatti,

Highlights
•Nitrogen fixation and assimilation were genetically modified in Azotobater sp.

•Mutant strains allowed a high dynamic range of external control of GS activity.

•Mutant strains released copious amounts of ammonium into the growth medium.

•Inoculation with Azotobacter substituted for N-fertilizer for microalgae and plants.

Abstract
The biological nitrogen fixation carried out by some Bacteria and Archaea is one of the most attractive alternatives to synthetic nitrogen fertilizers. However, with the exception of the symbiotic rhizobia-legumes system, progress towards a more extensive realization of this goal has been slow. In this study we manipulated the endogenous regulation of both nitrogen fixation and assimilation in the aerobic bacterium Azotobacter vinelandii. Substituting an exogenously inducible promoter for the native promoter of glutamine synthetase produced conditional lethal mutant strains unable to grow diazotrophically in the absence of the inducer. This mutant phenotype could be reverted in a double mutant strain bearing a deletion in the nifL gene that resulted in constitutive expression of nif genes and increased production of ammonium. Under GS non-inducing conditions both the single and the double mutant strains consistently released very high levels of ammonium (>20 mM) into the growth medium. The double mutant strain grew and excreted high levels of ammonium under a wider range of concentrations of the inducer than the single mutant strain. Induced mutant cells could be loaded with glutamine synthetase at different levels, which resulted in different patterns of extracellular ammonium accumulation afterwards. Inoculation of the engineered bacteria into a microalgal culture in the absence of sources of C and N other than N2 and CO2 from the air, resulted in a strong proliferation of microalgae that was suppressed upon addition of the inducer. Both single and double mutant strains also promoted growth of cucumber plants in the absence of added N-fertilizer, while this property was only marginal in the parental strain. This study provides a simple synthetic genetic circuit that might inspire engineering of optimized inoculants that efficiently channel N2 from the air into crops.

Keywords
Nitrogen fixation, Nitrogen assimilation, Ammonium excretion, Fertilization, Plants, Microalgae



DOI: https://doi.org/10.1016/j.ymben.2017.01.002